HOW to Basic Orientation ?

I am not too familiar with shooting Canon tethered to C1 (usually shoot to card). I would like to shoot portraits and have them import as portraits. Right now I am shooting portraits, but they are appearing as landscapes, and must be rotated 90 degrees after being imported. This happens both with my older 1ds and a 1ds MarkII . Is this an issue to be addressed through the c1 software, or the camera body? My old 1ds does not have an orientation sensor on board, the new Mark II does. Will that fix the issue on the Mark II. Is there a way around it on the older 1ds? Thanks. I appreciate any advice you may have.

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